extract hard links

.gitignore

@@ -1,6 +1,10 @@
 *.pyc
 *.egg-info
 
+*.sqlite
+*.mbtiles
+*.pbf
+
 .env
 .DS_Store
 

docs/extract.md

@@ -0,0 +1,14 @@
+### native mapbox/mbutil
+
+Filesystem      1K-blocks       Used Available Use% Mounted on
+/dev/loop0     1,474,386,100 1,119,622,516 354,763,584  76% /data/ofm/runs/planet_20231208_091355/mnt
+
+Filesystem        Inodes     IUsed     IFree IUse% Mounted on
+/dev/loop0     393,216,000 269,252,174 123,963,826   69% /data/ofm/runs/planet_20231208_091355/mnt
+
+
+
+### extract dedupl
+
+39,570,683 dedupl files
+

scripts/mbtiles_extractor/extract.py

@@ -0,0 +1,98 @@
+#!/usr/bin/env python3
+import json
+import shutil
+import sqlite3
+import sys
+from pathlib import Path
+
+import click
+
+
+@click.command()
+@click.argument(
+    'mbtiles_path',
+    type=click.Path(exists=True, dir_okay=False, file_okay=True, path_type=Path),
+)
+@click.argument('dir_path', type=click.Path(dir_okay=True, file_okay=False, path_type=Path))
+def cli(mbtiles_path: Path, dir_path: Path):
+    """
+    Extracts a mbtiles sqlite to a folder
+    Deduplicating identical tiles as hard-links
+
+    used for reference: https://github.com/mapbox/mbutil
+    """
+
+    if dir_path.exists() and any(dir_path.iterdir()):
+        sys.exit('Dir not empty')
+
+    dir_path.mkdir(exist_ok=True)
+
+    conn = sqlite3.connect(mbtiles_path)
+    c = conn.cursor()
+
+    write_metadata(c, dir_path=dir_path)
+    write_dedupl_files(c, dir_path=dir_path)
+    write_tile_file(c, dir_path=dir_path)
+
+    # remove dedupl files at the end
+    shutil.rmtree(dir_path / 'dedupl')
+
+
+def write_metadata(c, *, dir_path):
+    metadata = dict(c.execute('select name, value from metadata').fetchall())
+    json.dump(metadata, open(dir_path / 'metadata.json', 'w'), indent=2)
+
+
+def write_dedupl_files(c, *, dir_path):
+    # dedupl files
+    # write out the tiles_data files into a multi-level folder
+    total = c.execute('select count(*) from tiles_data').fetchone()[0]
+
+    c.execute('select tile_data_id, tile_data from tiles_data')
+    for i, row in enumerate(c, start=1):
+        dedupl_id = row[0]
+        dedupl_path = dir_path / 'dedupl' / dedupl_helper_path(dedupl_id)
+        dedupl_path.parent.mkdir(parents=True, exist_ok=True)
+        with open(dedupl_path, 'wb') as fp:
+            fp.write(row[1])
+            print(f'written dedupl file {i}/{total}: {dedupl_id}')
+
+
+def write_tile_file(c, *, dir_path):
+    total = c.execute('select count(*) from tiles_shallow').fetchone()[0]
+
+    c.execute('select zoom_level, tile_column, tile_row, tile_data_id from tiles_shallow')
+    for i, row in enumerate(c, start=1):
+        z = row[0]
+        x = row[1]
+        y = flip_y(z, row[2])
+        dedupl_id = row[3]
+
+        dedupl_path = dir_path / 'dedupl' / dedupl_helper_path(dedupl_id)
+
+        tile_path = dir_path / 'tiles' / str(z) / str(x) / f'{y}.pbf'
+        tile_path.parent.mkdir(parents=True, exist_ok=True)
+
+        # create the hard link
+        tile_path.hardlink_to(dedupl_path)
+        print(f'hard link created {i}/{total}: {tile_path}')
+
+
+def dedupl_helper_path(dedupl_id: int) -> Path:
+    """
+    Naming 200 million files such that each subdir has max 1000 children
+    """
+
+    str_num = f'{dedupl_id:09}'
+    l1 = str_num[:3]
+    l2 = str_num[3:6]
+    l3 = str_num[6:]
+    return Path(l1) / l2 / f'{l3}.pbf'
+
+
+def flip_y(zoom, y):
+    return (2**zoom - 1) - y
+
+
+if __name__ == '__main__':
+    cli()

scripts/tile_gen/extract.sh

@@ -27,8 +27,8 @@ rm -f image.ext4
 # make a sparse file
 # make sure it's bigger then the current OSM output
 # less fragmentation with fallocate
-fallocate -l 150G image.ext4
+fallocate -l 1500G image.ext4
-#truncate -s 150G image.ext4
+#truncate -s 1500G image.ext4
 
 
 mke2fs -t ext4 -v \
@@ -42,10 +42,14 @@ mke2fs -t ext4 -v \
 mkdir mnt
 sudo mount -v \
   -t ext4 \
-  -o nobarrier,noatime,data=writeback,commit=100 \
+  -o nobarrier,noatime \
   image.ext4 mnt
 
-sudo /data/ofm/tile_gen/venv/bin/mb-util output.mbtiles mnt/extract
+sudo chown ofm:ofm -R mnt
+
+../../tile_gen/venv/bin/python ../../tile_gen/extract.py output.mbtiles mnt/extract \
+  > "extract_out.log" 2> "extract_err.log"
+
 sudo umount mnt
 
 resize2fs -M image.ext4

scripts/tile_gen/planetiler_monaco.sh

@@ -16,7 +16,7 @@ java -Xmx1g \
   `# Store temporary node locations at fixed positions in a memory-mapped file` \
   --nodemap-type=array --storage=mmap \
   --force \
-  > "output.log" 2> "err.log"
+  > "planetiler_out.log" 2> "planetiler_err.log"
 
 
 

scripts/tile_gen/planetiler_planet.sh

@@ -16,7 +16,7 @@ java -Xmx30g \
   `# Store temporary node locations at fixed positions in a memory-mapped file` \
   --nodemap-type=array --storage=mmap \
   --force \
-  > "output.log" 2> "err.log"
+  > "planetiler_out.log" 2> "planetiler_err.log"